PICES - Revision history

Kate Evans at 15:58, 12 February 2026

2026-02-12T15:58:54Z

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	* [[Page authors\|Page authors]]: [[CamRichon]]		* [[Page authors\|Page authors]]: [[CamRichon]]

CamRichon: /* Classic examples */

2026-02-12T13:52:28Z

Classic examples

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	=== Classic examples ===		=== Classic examples ===
	The reference article describing the main features and parameters of the model is: Aumont, O., Ethé, C., Tagliabue, A., Bopp, L., and Gehlen, M.: PISCES-v2: an ocean biogeochemical model for carbon and ecosystem studies, Geosci. Model Dev., 8, 2465–2513, https://doi.org/10.5194/gmd-8-2465-2015, 2015		The reference article describing the main features and parameters of the model is: Aumont, O., Ethé, C., Tagliabue, A., Bopp, L., and Gehlen, M.: PISCES-v2: an ocean biogeochemical model for carbon and ecosystem studies, Geosci. Model Dev., 8, 2465–2513, https://doi.org/10.5194/gmd-8-2465-2015, 2015

	All informations on the latest developpements (including access to code) can be found at: https://www.pisces-community.org/		All informations on the latest developpements (including access to code) can be found at: https://www.pisces-community.org/

CamRichon: /* Recent applications */

2026-02-12T13:49:46Z

Recent applications

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	=== Recent applications ===		=== Recent applications ===
			Several versions of PISCES have been developped to address specific research questions.
			The verified versions (with public distribution of the codes) currently include:
			* PISCES-gas which models the cycle of additional compounds emitted to the atmosphere such as N2O, DMS and CO (Conte et al., 2019 ; Séférian et al., 2020 ; Conte et al., 2020, Berthet et al., 2023)<ref>Conte, L., Szopa, S., Séférian, R., and Bopp, L.: The oceanic cycle of carbon monoxide and its emissions to the atmosphere, Biogeosciences, 16, 881–902, https://doi.org/10.5194/bg-16-881-2019, 2019</ref><ref> Conte, L., Szopa, S., Aumont, O., Gros, V., & Bopp, L. (2020). Sources and sinks of isoprene in the global open ocean: Simulated patterns and emissions to the atmosphere. Journal of Geophysical Research: Oceans, 125, e2019JC015946. https://doi.org/10.1029/2019JC015946</ref><ref> Séférian, Roland; Berthet, Sarah; Yool, Andrew; Palmiéri, Julien; Bopp, Laurent; Tagliabue, Alessandro; Kwiatkowski, Lester; Aumont, Olivier; Christian, James; Dunne, John; Gehlen, Marion; Ilyina, Tatiana; John, Jasmin G; Li, Hongmei; Long, Matthew C; Luo, Jessica Y; Nakano, Hideyuki; Romanou, Anastasia; Schwinger, Jörg; Stock, Charles; Santana-Falcón, Yeray; Takano, Yohei; Tjiputra, Jerry; Tsujino, Hiroyuki; Watanabe, Michio; Wu, Tongwen; Wu, Fanghua; Yamamoto, Akitomo
			Tracking Improvement in Simulated Marine Biogeochemistry Between CMIP5 and CMIP6, Current Climate Change Reports, vol. 6, no. 3, pp. 95-119, 2020, ISSN: 2198-6061 </ref><ref> Berthet, S.; Jouanno, J.; Séférian, R.; Gehlen, M.; Llovel, W.
			How does the phytoplankton–light feedback affect the marine N2O inventory? Earth System Dynamics, vol. 14, no. 2, pp. 399–412, 2023 </ref>.

			* PISCES-iso which represents 13C and 15N (Buchanan et al., 2021)<ref> Buchanan, Pearse J; Aumont, Olivier; Bopp, Laurent; Mahaffey, Claire; Tagliabue, Alessandro Impact of intensifying nitrogen limitation on ocean net primary production is fingerprinted by nitrogen isotopes, Nature Communications, vol. 12, no. 1, pp. 6214, 2021.</ref>

			* PISCES-Byonic which in addition to Fe, describes the cycles of the trace metals Co, Zn Mn and Cu (Tagliabue et al., 2018 ; Weber et al., 2018 ; Richon and Tagliabue, 2019, 2021)<ref> Tagliabue, A., Hawco, N. J., Bundy, R. M., Landing, W. M., Milne, A., Morton, P. L., & Saito, M. A. (2018). The role of external inputs and internal cycling in shaping the global ocean cobalt distribution: Insights from the first cobalt biogeochemical model. Global Biogeochemical Cycles, 32, 594–616. https://doi.org/10.1002/2017GB005830 </ref><ref> Richon, C., & Tagliabue, A. (2021). Biogeochemical feedbacks associated with the response of micronutrient recycling by zooplankton to climate change. Global Change Biology, 27, 4758–4770. https://doi.org/10.1111/gcb.15789</ref><ref> Richon, C., & Tagliabue, A. (2019). Insights into the major processes driving the global distribution of copper in the ocean from a global model. Global Biogeochemical Cycles, 33, 1594–1610. https://doi.org/10.1029/2019GB006280</ref>.

	== Limitations ==		== Limitations ==

CamRichon: /* Classic examples */

2026-02-12T13:32:45Z

Classic examples

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	=== Classic examples ===		=== Classic examples ===
			The reference article describing the main features and parameters of the model is: Aumont, O., Ethé, C., Tagliabue, A., Bopp, L., and Gehlen, M.: PISCES-v2: an ocean biogeochemical model for carbon and ecosystem studies, Geosci. Model Dev., 8, 2465–2513, https://doi.org/10.5194/gmd-8-2465-2015, 2015
			All informations on the latest developpements (including access to code) can be found at: https://www.pisces-community.org/

	=== Recent applications ===		=== Recent applications ===

CamRichon: /* Scales of interest */

2026-02-12T13:30:21Z

Scales of interest

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	== Scales of interest ==		== Scales of interest ==
	PISCES has been developped and used for studying a variety of biogeochemical questions at the global and regional scale (Mediterranean, Indian Ocean, North Atlantic...).		PISCES has been developped and used for studying a variety of biogeochemical questions at the global and regional scale (Mediterranean, Indian Ocean, North Atlantic...)<ref> Santana-Falcón, Yeray; Mason, Evan; Arístegui, Javier
	Temporal scales include seasonnal to interannual variability. PISCES is also regularly used to study past and future climates (incl. ~~Distant~~ past and futures).		Offshore transport of organic carbon by upwelling filaments in the Canary Current System, Progress in Oceanography, vol. 186, pp. 102322, 2020, ISSN: 00796611.</ref><ref> Richon, Camille; Dutay, Jean-Claude; Dulac, François; Wang, Rong; Balkanski, Yves; Nabat, Pierre; Aumont, Olivier; Desboeufs, Karine; Laurent, Benoît; Guieu, Cécile; Raimbault, Patrick; Beuvier, Jonathan Modeling the Impacts of Atmospheric Deposition of Nitrogen and Desert Dust-Derived Phosphorus on Nutrients and Biological Budgets of the Mediterranean Sea, Progress in Oceanography, vol. 163, pp. 21–39, 2018. </ref>.

			Temporal scales include seasonnal to interannual variability. PISCES is also regularly used to study past and future climates (incl. distant past and futures)<ref> Sarr, A-C; Donnadieu, Yannick; Laugié, Marie; Ladant, J-B; Suchéras-Marx, Baptiste; Raisson, François Ventilation Changes Drive Orbital-Scale Deoxygenation Trends in the Late Cretaceous Ocean In: Geophysical Research Letters, vol. 49, no. 19, pp. e2022GL099830, 2022.</ref><ref> Kwiatkowski, Lester; Torres, Olivier; Bopp, Laurent; Aumont, Olivier; Chamberlain, Matthew; Christian, James R; Dunne, John P; Gehlen, Marion; Ilyina, Tatiana; John, Jasmin G; Lenton, Andrew; Li, Hongmei; Lovenduski, Nicole S; Orr, James C; Palmieri, Julien; Santana-Falcón, Yeray; Schwinger, Jörg; Séférian, Roland; Stock, Charles A; Tagliabue, Alessandro; Takano, Yohei; Tjiputra, Jerry; Toyama, Katsuya; Tsujino, Hiroyuki; Watanabe, Michio; Yamamoto, Akitomo; Yool, Andrew; Ziehn, Tilo
			Twenty-First Century Ocean Warming, Acidification, Deoxygenation, and Upper-Ocean Nutrient and Primary Production Decline from CMIP6 Model Projections, Biogeosciences, vol. 17, no. 13, pp. 3439-3470, 2020, ISSN: 1726-4170. </ref>

	== Data inputs ==		== Data inputs ==

CamRichon at 13:19, 12 February 2026

2026-02-12T13:19:06Z

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			{{BreadcrumbsCellular}}

			* [[Page authors\|Page authors]]: [[CamRichon]]
			* [[Responsible curator\|Responsible curator]]: [[CamRichon]]
			----

			__TOC__
			<div class="model-box">
			{\| class="model-ib"
			! Model type
			\|-
			\| '''Approach:''' Mechanistic
			\|-
			\| '''Computational demand:''' HPC
			\|-
			\| '''Typical physical scales:''' grid: C-type grid. Global resolution : 1 or 2°, regional resolution from 1/12° to 1/36°
			\|-
			\| '''Appropriate timescales:''' time step: typically around 1400-5400s

			output:
			\|}
			</div>
			<div style="clear:both"></div>

	== Model overview ==		== Model overview ==
	PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015). It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean).See https://www.pisces-community.org/.		PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015)<ref>Aumont, O., Ethé, C., Tagliabue, A., Bopp, L., and Gehlen, M.: PISCES-v2: an ocean biogeochemical model for carbon and ecosystem studies, Geosci. Model Dev., 8, 2465–2513, https://doi.org/10.5194/gmd-8-2465-2015, 2015. </ref>. It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean). See https://www.pisces-community.org/.

			== Scales of interest ==
			PISCES has been developped and used for studying a variety of biogeochemical questions at the global and regional scale (Mediterranean, Indian Ocean, North Atlantic...).
			Temporal scales include seasonnal to interannual variability. PISCES is also regularly used to study past and future climates (incl. Distant past and futures).

			== Data inputs ==

			== Example Studies & Code ==

			=== Classic examples ===

			=== Recent applications ===

			== Limitations ==

			== References ==
			<references/>
			[[Category:Main Pages\|Model types]]

CamRichon at 13:10, 12 February 2026

2026-02-12T13:10:00Z

← Older revision		Revision as of 06:10, 12 February 2026
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	Model overview		== Model overview ==
	PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015). It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean).See https://www.pisces-community.org/.		PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015). It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean).See https://www.pisces-community.org/.

CamRichon: Created page with "Model overview PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015). It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean).See https://www.pisces-community.org/."

2026-02-12T13:06:07Z

Created page with "Model overview PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015). It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean).See https://www.pisces-community.org/."

New page

Model overview
PISCES is a biogeochemical model that simulates marine biological productivity and describes the biogeochemical cycles of carbon, oxygen and the main nutrients (P, N, Si, Fe) (Aumont et al., 2015). It is the marine biogeochemistry component of two ocean modeling platforms (NEMO and CROCO), three Earth System models (IPSL-CM, CNRM-CM and EC-Earth) and one operational oceanographic system (MERCATOR-Ocean).See https://www.pisces-community.org/.