Isotopic measurements---15N-labeled ammonium (15NH4+) accumulation rate in 15NO3- added incubation
| DNRA rate (15NH4+ accumulation) |
|---|
| Approach: 15NO3- addition; 15NH4+ accumulation measured by sequential conversion to N2O |
| Context: incubation, lab |
| Spatial scale: point sample |
| Temporal scale: hours |
| Units: µmol N m-2 d-1 |
| Community captured: bulk |
| Co-measurements: nitrite, nitrate |
Method Overview
Dissimilatory nitrate reduction to ammonium (DNRA) is quantified by tracking the appearance of 15N in the ammonium pool after addition of 15NO3- to anoxic incubations. DNRA bacteria reduce NO3- directly to NH4+, bypassing N2 production. After incubation, the 15NH4+ fraction in the dissolved ammonium pool is measured using the sequential conversion method of Kuroiwa et al. (2020): ammonium is oxidized to NO2- using hypobromite, then converted to N2O by sodium azide in acetic acid, and the N2O isotopologue ratios are measured by GC-IRMS[1].
Scale of measurement
Point samples using anoxic incubations of hours. Most applicable to suboxic or anoxic water layers and sediments where DNRA organisms are active.
Data generated
DNRA rates in µmol N m-2 d-1 or nmol N L-1 d-1. Combined with denitrification measurements (e.g., N2 production), the relative competition between DNRA and denitrification as nitrate sinks can be quantified.
Units & currency
Units are µmol N m-2 d-1. The currency is nitrogen.
Sample size
Typical samples are 250 mL to 1 L in volume.
Repositories & databases
Limitations
Nitrification occurring during the incubation can produce unlabelled NH4+ → 14NO2- → 14NO3-, which dilutes the 15N pool. Uptake of the produced 15NH4+ by nitrifying organisms or phytoplankton during the incubation reduces the measurable signal. These isotope dilution effects require correction for accurate rate estimates.
Example Applications & Protocols
Classic examples
- Kuroiwa et al. (2020) Measurement of the potential rates of dissimilatory nitrate reduction to ammonium based on 14NH4+/15NH4+ analyses via sequential conversion to N2O [1]
Recent applications
- Bonaglia et al. (2016) Denitrification and DNRA at the Baltic Sea oxic-anoxic interface [2]
Common calculations/conversions
- DNRA rate (nmol N L-1 d-1) = [15NH4+]accumulated / atom% 15N enrichment of NO3- pool / incubation time.
References
- ↑ 1.0 1.1 Kuroiwa, M., Doane, T. A., & Horwáth, W. R. (2020). Measurement of the potential rates of dissimilatory nitrate reduction to ammonium based on 14NH4+/15NH4+ analyses via sequential conversion to N2O. Journal of Visualized Experiments, 164, e59562. https://doi.org/10.3791/59562
- ↑ Bonaglia, S., Deutsch, B., Bartoli, M., Marchant, H. K., & Brüchert, V. (2016). Denitrification and DNRA at the Baltic Sea oxic-anoxic interface: substrate spectrum and kinetics. Limnology and Oceanography, 61(5), 1900–1915. https://doi.org/10.1002/lno.10343